Overall Karthus belives that what he does is good,but the problem is that Karthus forces his belief onto others.
It is also rather understandable,because death is a very intimidating thing,so he probably thinks that people will understand the benefits of undeath once they are dead(also he probably wants to kill people before guys like Thresh get their hands on them).
The problem is that even in death,not everyone is ok with being undead,because when Illaoi purified the spirits from the shadow isles,some spirits where happy to go on to the afterlife,while others fled to remain undead.