While I don't like the way they handled Varus and Karma I don't think this was simply change for the sake of change.
Varus was changed because riot clung to the "5 darkin"-thing and the bow of Varus was just too darkin-like to ignore.However they likely didn't want to leave one of the 5 darkin unplayable,hence why they changed Varus into the darkin and not the person who goes into the pit.
Karma was changed because she was lacking in terms of thematic uniqueness.Her theme is supposed to be the enlightened one,essentially lols version of budda.But in the previous lore,that didn't mean anything,she was just an asian looking mage with green magic.Adding the reincarnation theme fits the idea of someone enlightened and makes her more unique among the champions.
I don't think that either of these lore updates were good,but I definitely can see the reason as for why they made these changes in the first place.